{ "description": "STARS implementation guide", "_filename": "ImplementationGuide-csiro.stars.json", "package_name": "csiro.stars", "definition": { "page": { "name": "toc.html", "page": [ { "name": "index.html", "title": "Home", "sourceUrl": "index.html", "generation": "markdown" }, { "name": "workflow.html", "title": "Workflow", "sourceUrl": "workflow.html", "generation": "markdown" }, { "name": "stars-client.html", "title": "STARS Client", "sourceUrl": "stars-client.html", "generation": "markdown" }, { "name": "stars-api.html", "title": "STARS Api", "sourceUrl": "stars-api.html", "generation": "markdown" }, { "name": "message-format.html", "title": "Message Format", "sourceUrl": "message-format.html", "generation": "markdown" }, { "name": "servicerequest.html", "title": "Profile - ServiceRequest", "sourceUrl": "servicerequest.html", "generation": "markdown" }, { "name": "diagnosticreport.html", "title": "Profile - DiagnosticReport", "sourceUrl": "diagnosticreport.html", "generation": "markdown" }, { "name": "migrating.html", "title": "Migrating", "sourceUrl": "migrating.html", "generation": "markdown" }, { "name": "downloads.html", "title": "Downloads", "sourceUrl": "downloads.html", "generation": "markdown" } ], "title": "Table of Contents", "sourceUrl": "toc.html", "generation": "html" }, "resource": [ { "name": "Analysis STARS", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "CodeSystem" } ], "isExample": false, "reference": { "reference": "CodeSystem/analysis-stars" }, "description": "STARS Analysis" }, { "name": "Australian Property Identification Code (PIC)", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:extension" } ], "isExample": false, "reference": { "reference": "StructureDefinition/property-identification-code" }, "description": "Property Identification Code (PIC) as provided by the relevant state for tracing and controlling disease through the supply chain." }, { "name": "bundle-example-cat3-cow-diagnosticreport", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Bundle" } ], "isExample": true, "reference": { "reference": "Bundle/aa4dd75c-673b-4263-8c70-6e92fef4a48b" }, "description": "Example send diagnostic report (results) to source laboratory" }, { "name": "bundle-example-cat3-cow-servicerequest", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Bundle" } ], "isExample": true, "reference": { "reference": "Bundle/zz4dd75c-673b-4263-8c70-6e92fef4a48b" }, "description": "Example send service request (specimens) to destination laboratory for testing" }, { "name": "bundle-qa-diagnosticreport-complete", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Bundle" } ], "isExample": true, "reference": { "reference": "Bundle/zzzzzzzz-bbbb-zzzz-zzzz-zzzzzzzzaaaa" }, "description": "QA Bundle for DiagnosticReport Bundle - Complete" }, { "name": "bundle-qa-diagnosticreport-minimal", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Bundle" } ], "isExample": true, "reference": { "reference": "Bundle/zzzzzzzz-bbbb-zzzz-zzzz-zzzzzzzzbbbb" }, "description": "QA Bundle for DiagnosticReport Bundle - Minimal" }, { "name": "bundle-qa-documentreference-complete", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Bundle" } ], "isExample": true, "reference": { "reference": "Bundle/zzzzzzzz-cccc-zzzz-zzzz-zzzzzzzzaaaa" }, "description": "QA Bundle for DocumentReference Bundle - Complete" }, { "name": "bundle-qa-servicerequest-complete", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Bundle" } ], "isExample": true, "reference": { "reference": "Bundle/zzzzzzzz-aaaa-zzzz-zzzz-zzzzzzzzaaaa" }, "description": "QA Bundle for ServiceRequest Bundle - Complete" }, { "name": "bundle-qa-servicerequest-minimal", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Bundle" } ], "isExample": true, "reference": { "reference": "Bundle/zzzzzzzz-aaaa-zzzz-zzzz-zzzzzzzzbbbb" }, "description": "QA Bundle for ServiceRequest Bundle - Minimal" }, { "name": "CSIRO STARS DiagnosticReport Profile", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:resource" } ], "isExample": false, "reference": { "reference": "StructureDefinition/csiro-stars-diagnosticreport" }, "description": "Results returned through a Diagnostic Report" }, { "name": "CSIRO STARS Location Profile", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:resource" } ], "isExample": false, "reference": { "reference": "StructureDefinition/csiro-stars-location" }, "description": "A location being an address, GPS position or Property Identification Code (PIC)." }, { "name": "CSIRO STARS MessageHeader Profile", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:resource" } ], "isExample": false, "reference": { "reference": "StructureDefinition/csiro-stars-messageheader" }, "description": "MessageHeader is used in bundles to assist directing to the correct destination" }, { "name": "CSIRO STARS Observation Result Profile", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:resource" } ], "isExample": false, "reference": { "reference": "StructureDefinition/csiro-stars-observation-result" }, "description": "Results, Measurements and simple assertions" }, { "name": "CSIRO STARS Patient Animal Profile", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:extension" } ], "isExample": false, "reference": { "reference": "StructureDefinition/csiro-stars-patient-animal" }, "description": "An animals species, breed and gender status" }, { "name": "CSIRO STARS Patient Profile", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:resource" } ], "isExample": false, "reference": { "reference": "StructureDefinition/csiro-stars-patient" }, "description": "A patient, primarily animal" }, { "name": "CSIRO STARS Practitioner Profile", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:resource" } ], "isExample": false, "reference": { "reference": "StructureDefinition/csiro-stars-practitioner" }, "description": "A practitioner or other person" }, { "name": "CSIRO STARS RelatedPerson Profile", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:resource" } ], "isExample": false, "reference": { "reference": "StructureDefinition/csiro-stars-relatedperson" }, "description": "A person that is related to a patient in some way." }, { "name": "CSIRO STARS ServiceRequest Profile", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:resource" } ], "isExample": false, "reference": { "reference": "StructureDefinition/csiro-stars-servicerequest" }, "description": "A Service Request, no changes yet" }, { "name": "CSIRO STARS Specimen Profile", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:resource" } ], "isExample": false, "reference": { "reference": "StructureDefinition/csiro-stars-specimen" }, "description": "A specimen / sample" }, { "name": "diagnosticreport-cat3-bat", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-diagnosticreport" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "DiagnosticReport" } ], "isExample": true, "reference": { "reference": "DiagnosticReport/Example-ID" }, "description": "Example DiagnosticReport" }, { "name": "documentreference-1-qa-diagnosticreport-complete", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "DocumentReference" } ], "isExample": true, "reference": { "reference": "DocumentReference/documentreference-1-qa-diagnosticreport-complete" }, "description": "QA DocumentReference for DiagnosticReport Bundle" }, { "name": "documentreference-1-qa-diagnosticreport-minimal", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "DocumentReference" } ], "isExample": true, "reference": { "reference": "DocumentReference/documentreference-1-qa-diagnosticreport-minimal" }, "description": "QA DocumentReference for DiagnosticReport Bundle" }, { "name": "documentreference-1-qa-documentreference-complete", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "DocumentReference" } ], "isExample": true, "reference": { "reference": "DocumentReference/documentreference-1-qa-documentreference-complete" }, "description": "QA DocumentReference 1 for DocumentReference Bundle" }, { "name": "documentreference-2-qa-documentreference-complete", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "DocumentReference" } ], "isExample": true, "reference": { "reference": "DocumentReference/documentreference-2-qa-documentreference-complete" }, "description": "QA DocumentReference 2 for DocumentReference Bundle" }, { "name": "Is Human", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:extension" } ], "isExample": false, "reference": { "reference": "StructureDefinition/is-human" }, "description": "Status of a speciemen is human or not" }, { "name": "location-example", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-location" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Location" } ], "isExample": true, "reference": { "reference": "Location/location-example" }, "description": "Example Location" }, { "name": "MessageHeader-DiagnosticReport", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-messageheader" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "MessageHeader" } ], "isExample": true, "reference": { "reference": "MessageHeader/MessageHeader-DiagnosticReport" }, "description": "Example of DiagnosticReport message header" }, { "name": "MessageHeader-ServiceRequest", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-messageheader" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "MessageHeader" } ], "isExample": true, "reference": { "reference": "MessageHeader/MessageHeader-ServiceRequest" }, "description": "Example of ServiceRequest message header" }, { "name": "observation-example-category3-bat-ABLVIn", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Observation" } ], "isExample": true, "reference": { "reference": "Observation/observation-example-category3-bat-ABLVIn" }, "description": "Example Observation" }, { "name": "observation-example-category3-bat-ABLVPt", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Observation" } ], "isExample": true, "reference": { "reference": "Observation/observation-example-category3-bat-ABLVPt" }, "description": "Example Observation" }, { "name": "observation-example-category3-bat-RABIESFAV", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-observation-result" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Observation" } ], "isExample": true, "reference": { "reference": "Observation/observation-example-category3-bat-RABIESFAV" }, "description": "Example Observation" }, { "name": "Patient Age", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:extension" } ], "isExample": false, "reference": { "reference": "StructureDefinition/patient-age" }, "description": "Age of Patient when specimens were taken. You must specify value AND code AND system as per https://hl7.org/fhir/R5/valueset-age-units.html" }, { "name": "Patient Age Grouping", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:extension" } ], "isExample": false, "reference": { "reference": "StructureDefinition/patient-age-grouping" }, "description": "Grouping of Patient age when specimens were collected." }, { "name": "Patient-Bat", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-patient" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Patient" } ], "isExample": true, "reference": { "reference": "Patient/Patient-Bat" }, "description": "Example Patient bat carcass submitted for rabies exclusion" }, { "name": "Patient-Example1", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-patient" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Patient" } ], "isExample": true, "reference": { "reference": "Patient/Patient-Example1" }, "description": "Example patient entry" }, { "name": "practitioner-example", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-practitioner" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Practitioner" } ], "isExample": true, "reference": { "reference": "Practitioner/practitioner-example" }, "description": "Example Practitioner" }, { "name": "relatedperson-example", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-relatedperson" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "RelatedPerson" } ], "isExample": true, "reference": { "reference": "RelatedPerson/relatedperson-example" }, "description": "Example RelatedPerson" }, { "name": "Requisition", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:extension" } ], "isExample": false, "reference": { "reference": "StructureDefinition/requisition" }, "description": "Original identifier from the ServiceRequest requisition." }, { "name": "servicerequest-example", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-servicerequest" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "ServiceRequest" } ], "isExample": true, "reference": { "reference": "ServiceRequest/servicerequest-example" }, "description": "Example ServiceRequest" }, { "name": "Species STARS", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "CodeSystem" } ], "isExample": false, "reference": { "reference": "CodeSystem/species-stars" }, "description": "STARS Species" }, { "name": "Specimen Collection Location", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:extension" } ], "isExample": false, "reference": { "reference": "StructureDefinition/specimen-collection-location" }, "description": "Location that the patient originated or was sampled at. eg: the farm address where the animal was located or the gps location where the animal was found and sampled." }, { "name": "Specimen Type STARS", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "CodeSystem" } ], "isExample": false, "reference": { "reference": "CodeSystem/specimen-type-stars" }, "description": "STARS Specimen Type" }, { "name": "specimen-example", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-specimen" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Specimen" } ], "isExample": true, "reference": { "reference": "Specimen/specimen-example" }, "description": "Example Specimen" }, { "name": "specimen-example-bat", "profile": [ "https://starsapi.csiro.au/fhir-ig/stars/StructureDefinition/csiro-stars-specimen" ], "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "Specimen" } ], "isExample": true, "reference": { "reference": "Specimen/specimen-example-bat" }, "description": "Example Specimen bat" }, { "name": "STARS Analysis", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "ValueSet" } ], "isExample": false, "reference": { "reference": "ValueSet/analysis-value-set" }, "description": "A list of analysis as compiled from stars." }, { "name": "STARS Identifier Type", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "ValueSet" } ], "isExample": false, "reference": { "reference": "ValueSet/stars-identifiertype-value-set" }, "description": "Identifier types used to indicate requester or responder." }, { "name": "STARS Identifier Type", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "CodeSystem" } ], "isExample": false, "reference": { "reference": "CodeSystem/identifiertype-code-system" }, "description": "Codes describing various Identifier Types." }, { "name": "STARS Message Type", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "ValueSet" } ], "isExample": false, "reference": { "reference": "ValueSet/message-type-value-set" }, "description": "Message Types are used as MessageHeader events" }, { "name": "STARS Message Type", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "CodeSystem" } ], "isExample": false, "reference": { "reference": "CodeSystem/message-type-code-system" }, "description": "Codes describing supported Message Type events." }, { "name": "STARS Species", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "ValueSet" } ], "isExample": false, "reference": { "reference": "ValueSet/species-value-set" }, "description": "List of all species." }, { "name": "STARS Specimen Type", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "ValueSet" } ], "isExample": false, "reference": { "reference": "ValueSet/specimen-type-value-set" }, "description": "Codes describing various specimen types from SNOMED-CT." }, { "name": "STARS Submission Category", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "ValueSet" } ], "isExample": false, "reference": { "reference": "ValueSet/submission-category-value-set" }, "description": "Proposed submission category of the requested tests as per DAWE terminology regarding exotic diseases within Australia." }, { "name": "STARS Submission Category", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "CodeSystem" } ], "isExample": false, "reference": { "reference": "CodeSystem/submission-category-code-system" }, "description": "Codes describing levels of submission category." }, { "name": "Submission Category", "extension": [ { "url": "http://hl7.org/fhir/tools/StructureDefinition/resource-information", "valueString": "StructureDefinition:extension" } ], "isExample": false, "reference": { "reference": "StructureDefinition/csiro-stars-submission-category" }, "description": "The submission category of the tests requested as per DAWE terminology regarding exotic diseases within Australia." } ], 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