{
  "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.",
  "_filename": "ConceptMap-Genomics-specimen-primarysample.json",
  "package_name": "uk.nhsengland.genomics.r4",
  "date": "2024-08-15T00:00:00.000Z",
  "targetUri": "http://snomed.info/sct?fhir_vs=ecl/%3C%3C%20123038009%20",
  "group": [ {
    "source": "https://future.nhs.uk/NHSgenomics/view?objectId=222250117",
    "target": "http://snomed.info/sct",
    "element": [ {
      "code": "amniotic-fluid",
      "target": [ {
        "code": "119373006",
        "display": "Amniotic fluid specimen (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Amniotic Fluid"
    }, {
      "code": "blood",
      "target": [ {
        "code": "119297000",
        "display": "Blood specimen",
        "equivalence": "equivalent"
      } ],
      "display": "Blood"
    }, {
      "code": "bone-marrow-trephine",
      "target": [ {
        "code": "258585008",
        "display": "Bone marrow trephine specimen",
        "equivalence": "equivalent"
      } ],
      "display": "Bone Marrow Trephine"
    }, {
      "code": "bone-marrrow-aspirate",
      "target": [ {
        "code": "396997002",
        "display": "Specimen from bone marrow obtained by aspiration",
        "equivalence": "equivalent"
      } ],
      "display": "Bone Marrrow Aspirate"
    }, {
      "code": "buccals-smear",
      "target": [ {
        "code": "258564008",
        "display": "Buccal smear specimen",
        "equivalence": "equivalent"
      } ],
      "display": "Buccals Smear"
    }, {
      "code": "cerebrospinal-fluid",
      "target": [ {
        "code": "258450006",
        "display": "Cerebrospinal fluid specimen (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Cerebrospinal Fluid"
    }, {
      "code": "cord-blood",
      "target": [ {
        "code": "122556008",
        "display": "Cord blood specimen (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Cord Blood"
    }, {
      "code": "chorionic-villus-sampling",
      "target": [ {
        "code": "258565009",
        "display": "Chorionic villi specimen",
        "equivalence": "equivalent"
      } ],
      "display": "Chorionic Villus Sampling"
    }, {
      "code": "fetal-blood",
      "target": [ {
        "code": "737357006",
        "display": "Fetal blood specimen",
        "equivalence": "equivalent"
      } ],
      "display": "Fetal Blood"
    }, {
      "code": "fibroblasts",
      "target": [ {
        "code": "119333000",
        "display": "Fibroblast specimen",
        "equivalence": "equivalent"
      } ],
      "display": "Fibroblasts"
    }, {
      "code": "heart",
      "target": [ {
        "code": "127462005",
        "display": "Specimen from heart (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Heart"
    }, {
      "code": "kidney",
      "target": [ {
        "code": "127473003",
        "display": "Specimen from kidney (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Kidney"
    }, {
      "code": "liver",
      "target": [ {
        "code": "119383005",
        "display": "Specimen from liver (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Liver"
    }, {
      "code": "lymph-node",
      "target": [ {
        "code": "258589002",
        "display": "Lymph node specimen",
        "equivalence": "equivalent"
      } ],
      "display": "Lymph Node"
    }, {
      "code": "other",
      "target": [ {
        "code": "123038009",
        "comment": "Any other suitable descendant of 123038009|Specimen (specimen) not listed on this code. This should be provided by free text if no suitable SNOMED CT is found.",
        "display": "Specimen (specimen)",
        "equivalence": "wider"
      } ],
      "display": "Other"
    }, {
      "code": "pericardial",
      "target": [ {
        "code": "122571007",
        "display": "Pericardial fluid specimen (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Pericardial"
    }, {
      "code": "peritoneal",
      "target": [ {
        "code": "430250001",
        "display": "Specimen from peritoneum (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Peritoneal"
    }, {
      "code": "pleural-fluid",
      "target": [ {
        "code": "418564007",
        "display": "Pleural fluid specimen (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Pleural Fluid"
    }, {
      "code": "products of conception",
      "target": [ {
        "code": "258428005",
        "display": "Products of conception tissue specimen",
        "equivalence": "equivalent"
      } ],
      "display": "Products Of Conception"
    }, {
      "code": "saliva",
      "target": [ {
        "code": "119342007",
        "display": "Saliva specimen (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Saliva"
    }, {
      "code": "skeletal muscle",
      "target": [ {
        "code": "119331003",
        "display": "Skeletal muscle specimen (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Skeletal Muscle"
    }, {
      "code": "skin",
      "target": [ {
        "code": "608969007",
        "display": "Specimen from skin (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Skin"
    }, {
      "code": "spleen",
      "target": [ {
        "code": "433308004",
        "display": "Specimen from spleen (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Spleen"
    }, {
      "code": "tumour",
      "target": [ {
        "code": "258435002",
        "display": "Tumor tissue specimen (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Tumour"
    }, {
      "code": "urine",
      "target": [ {
        "code": "122575003",
        "display": "Urine specimen (specimen)",
        "equivalence": "equivalent"
      } ],
      "display": "Urine"
    } ]
  } ],
  "publisher": "NHS England",
  "purpose": "ConceptMap used for the translation and recording of concepts for the categories of primary sample types.This is intended for the element Specimen.type",
  "name": "GenomicsPrimarySample",
  "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at  http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at  https://www.hl7.org/fhir/license.html.",
  "type": null,
  "experimental": null,
  "resourceType": "ConceptMap",
  "title": "Genomics Primary Sample",
  "package_version": "0.4.1",
  "status": "draft",
  "id": "d7898044-2e33-48de-8cb7-170812dd9916",
  "kind": null,
  "url": "https://fhir.nhs.uk/ConceptMap/genomics-primarysample",
  "version": "0.0.1",
  "contact": [ {
    "name": "NHS England",
    "telecom": [ {
      "value": "interoperabilityteam@nhs.net",
      "system": "email"
    } ]
  } ]
}