{
"description": "Group of items applicable only to registries.",
"_filename": "StructureDefinition-nfdi4health-pr-mds-registry.json",
"package_name": "de.nfdi4health.mds",
"date": null,
"derivation": "constraint",
"publisher": "NFDI4Health",
"fhirVersion": "4.0.1",
"name": "NFDI4Health_PR_MDS_Registry",
"mapping": [ {
"uri": "http://hl7.org/v3",
"name": "RIM Mapping",
"identity": "rim"
}, {
"uri": "http://hl7.org/fhir/workflow",
"name": "Workflow Pattern",
"identity": "workflow"
}, {
"uri": "http://hl7.org/fhir/fivews",
"name": "FiveWs Pattern Mapping",
"identity": "w5"
}, {
"uri": "http://hl7.org/fhir/object-implementation",
"name": "Object Implementation Information",
"identity": "objimpl"
}, {
"name": "NFDI4Health to FHIR Mapping",
"identity": "NFDI4Health"
} ],
"abstract": false,
"type": "Library",
"experimental": null,
"resourceType": "StructureDefinition",
"title": "NFDI4Health PR MDS Registry",
"package_version": "2.0.0",
"status": "draft",
"id": "d419dfaa-0419-4286-a4c0-aae69b2462c1",
"kind": "resource",
"url": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"version": "0.9",
"differential": {
"element": [ {
"id": "Library",
"path": "Library",
"mapping": [ {
"map": "Design",
"identity": "NFDI4Health"
} ],
"constraint": [ {
"key": "biosamples-a",
"human": "0..*, if Design.dataSource.general == 'C70699'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='general').valueCoding.where(code = 'C70699').exists() implies extension.extension.where(url='biosamples').exists()"
}, {
"key": "biosamples-b",
"human": "0..0, if Design.dataSource.general != 'C70699'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='general').valueCoding.where(code = 'C70699').exists().not() implies extension.extension.where(url='biosamples').exists().not()"
}, {
"key": "imaging-a",
"human": "0..*, if Design.dataSource.general == '031'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='general').valueCoding.where(code = '031').exists() implies extension.extension.where(url='imaging').exists()"
}, {
"key": "imaging-b",
"human": "0..0, if Design.dataSource.general != '031'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='general').valueCoding.where(code = '031').exists().not() implies extension.extension.where(url='imaging').exists().not()"
}, {
"key": "omics-a",
"human": "0..*, if Design.dataSource.general == '033'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='general').valueCoding.where(code = '033').exists() implies extension.extension.where(url='omics').exists()"
}, {
"key": "omics-b",
"human": "0..0, if Design.dataSource.general != '033'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='general').valueCoding.where(code = '033').exists().not() implies extension.extension.where(url='omics').exists().not()"
}, {
"key": "supportingInformation-a",
"human": "Cardinality: 0..*, if Design.dataSharingPlan.generally == '373066001'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='generally').valueCoding.where(code = '373066001').exists() implies extension.extension.where(url='supportingInformation').exists()"
}, {
"key": "supportingInformation-b",
"human": "Cardinality: 0..0, if Design.dataSharingPlan.generally != '373066001'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='generally').valueCoding.where(code = '373066001').exists().not() implies extension.extension.where(url='supportingInformation').exists().not()"
}, {
"key": "timeFrame-a",
"human": "Cardinality: 0..*, if Design.dataSharingPlan.generally == '373066001'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='generally').valueCoding.where(code = '373066001').exists() implies extension.extension.where(url='timeFrame').exists()"
}, {
"key": "timeFrame-b",
"human": "Cardinality: 0..0, if Design.dataSharingPlan.generally != '373066001'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='generally').valueCoding.where(code = '373066001').exists().not() implies extension.extension.where(url='timeFrame').exists().not()"
}, {
"key": "accessCriteria-a",
"human": "Cardinality: 0..*, if Design.dataSharingPlan.generally == '373066001'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='generally').valueCoding.where(code = '373066001').exists() implies extension.extension.where(url='accessCriteria').exists()"
}, {
"key": "accessCriteria-b",
"human": "Cardinality: 0..0, if Design.dataSharingPlan.generally != '373066001'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='generally').valueCoding.where(code = '373066001').exists().not() implies extension.extension.where(url='accessCriteria').exists().not()"
}, {
"key": "recordLinkage-a",
"human": "Cardinality: 1..1, if Design.dataSharingPlan.recordLinkage == 'Yes'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='recordLinkage').where(value=true).exists() implies extension.where(url='https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-record-linkage').exists()"
}, {
"key": "recordLinkage-b",
"human": "Cardinality: 0..0, if Design.dataSharingPlan.recordLinkage == 'No'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='recordLinkage').where(value=false).exists() implies extension.where(url='https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-record-linkage').exists().not()"
}, {
"key": "legalBasisDetails-a",
"human": "Cardinality: 1..1, if RecordLinkage.legalBasis == 'True'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='legalBasis').where(value=true).exists() implies extension.extension.where(url='legalBasisDetails').exists()"
}, {
"key": "legalBasisDetails-b",
"human": "Cardinality: 0..0, if RecordLinkage.legalBasis == 'False'",
"source": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-registry",
"severity": "error",
"expression": "extension.extension.where(url='legalBasis').where(value=false).exists() implies extension.extension.where(url='legalBasisDetails').exists().not()"
} ]
}, {
"id": "Library.extension",
"min": 5,
"path": "Library.extension",
"slicing": {
"rules": "open",
"ordered": false,
"discriminator": [ {
"path": "url",
"type": "value"
} ]
}
}, {
"id": "Library.extension:groupsOfDiseases",
"max": "1",
"min": 1,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-groups-of-diseases" ]
} ],
"mapping": [ {
"map": "Design.groupsOfDiseases",
"identity": "NFDI4Health"
} ],
"sliceName": "groupsOfDiseases"
}, {
"id": "Library.extension:ethicsCommitteeApproval",
"max": "1",
"min": 0,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-library-ethics-approval" ]
} ],
"sliceName": "ethicsCommitteeApproval"
}, {
"id": "Library.extension:keywords",
"max": "*",
"min": 0,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-keywords" ]
} ],
"sliceName": "keywords"
}, {
"id": "Library.extension:descriptions",
"max": "1",
"min": 1,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-descriptions" ]
} ],
"mapping": [ {
"map": "Resource.descriptions",
"identity": "NFDI4Health"
} ],
"sliceName": "descriptions"
}, {
"id": "Library.extension:dataSource",
"max": "1",
"min": 0,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-data-source" ]
} ],
"sliceName": "dataSource"
}, {
"id": "Library.extension:subject",
"max": "1",
"min": 1,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-subject" ]
} ],
"sliceName": "subject"
}, {
"id": "Library.extension:outcomes",
"max": "*",
"min": 0,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-library-outcomes" ]
} ],
"sliceName": "outcomes"
}, {
"id": "Library.extension:assessments",
"max": "*",
"min": 0,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-assessments" ]
} ],
"sliceName": "assessments"
}, {
"id": "Library.extension:dataSharingPlan",
"max": "1",
"min": 1,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-data-sharing-plan" ]
} ],
"sliceName": "dataSharingPlan"
}, {
"id": "Library.extension:dataProviders",
"max": "1",
"min": 0,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-library-data-providers" ]
} ],
"sliceName": "dataProviders"
}, {
"id": "Library.extension:dataProvidersNumber",
"max": "1",
"min": 0,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-library-data-providers-number" ]
} ],
"sliceName": "dataProvidersNumber"
}, {
"id": "Library.extension:population",
"max": "1",
"min": 1,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-library-population" ]
} ],
"sliceName": "population"
}, {
"id": "Library.extension:recordLinkage",
"max": "1",
"min": 0,
"path": "Library.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-record-linkage" ]
} ],
"sliceName": "recordLinkage"
}, {
"id": "Library.identifier",
"path": "Library.identifier",
"short": "Alternative identifiers",
"mapping": [ {
"map": "Resource.idsAlternative",
"identity": "NFDI4Health"
} ],
"definition": "Group of items providing information about identifiers (IDs) assigned to the given [RESOURCE] by another registering systems, e.g. a registry of clinical trials or a data repository."
}, {
"id": "Library.identifier.type",
"min": 1,
"path": "Library.identifier.type",
"short": "Type of the registry",
"binding": {
"strength": "required",
"valueSet": "https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-id-type-nci-local",
"description": "Value set defining codes to specify the type of a resource identifier."
},
"mapping": [ {
"map": "Resource.idsAlternative.scheme",
"identity": "NFDI4Health"
} ],
"definition": "Type/name of the system where the given [RESOURCE] is already registered."
}, {
"id": "Library.identifier.value",
"min": 1,
"path": "Library.identifier.value",
"example": [ {
"label": "Identifier (ID) assigned to the given [RESOURCE] by another registering system, e.g. by a registry of clinical trials or a data repository.",
"valueString": "ISRCTN91495258"
} ],
"mapping": [ {
"map": "Resource.idsAlternative.identifier",
"identity": "NFDI4Health"
} ],
"definition": "Identifier"
}, {
"id": "Library.status",
"path": "Library.status",
"comment": "The item does not exist in NFDI4Health' MDS. Fixed to 'active' for all studies.",
"fixedCode": "active"
}, {
"id": "Library.subject[x]",
"path": "Library.subject[x]",
"slicing": {
"rules": "open",
"ordered": false,
"discriminator": [ {
"path": "$this",
"type": "type"
} ]
}
}, {
"id": "Library.subject[x]:subjectReference",
"max": "1",
"min": 0,
"path": "Library.subject[x]",
"type": [ {
"code": "Reference",
"targetProfile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-group-intended" ]
} ],
"mapping": [ {
"map": "Design.eligibilityCriteria",
"identity": "NFDI4Health"
} ],
"sliceName": "subjectReference"
}, {
"id": "Library.subject[x]:subjectCodeableConcept",
"max": "1",
"min": 0,
"path": "Library.subject[x]",
"type": [ {
"code": "CodeableConcept"
} ],
"mapping": [ {
"map": "Design.subject",
"identity": "NFDI4Health"
} ],
"sliceName": "subjectCodeableConcept"
}, {
"id": "Library.description",
"path": "Library.description",
"short": "Additional information about the [RESOURCE]",
"comment": "Short input help: You can provide here specific aspects of the [RESOURCE] that could not be captured by other fields.",
"mapping": [ {
"map": "Design.comment",
"identity": "NFDI4Health"
} ],
"definition": "Any additional information about specific aspects of the [RESOURCE] that could not be captured by other fields.."
}, {
"id": "Library.effectivePeriod",
"path": "Library.effectivePeriod",
"mapping": [ {
"map": "Design.administrativeInformation.startDate",
"identity": "NFDI4Health"
}, {
"map": "Design.administrativeInformation.endDate",
"identity": "NFDI4Health"
} ]
}, {
"id": "Library.effectivePeriod.start",
"path": "Library.effectivePeriod.start",
"short": "Start date",
"comment": "Additional information: Preferred date format: DD.MM.YYYY. | Short input help: In case of a planned [RESOURCE], enter the intended start date. In case of an ongoing [RESOURCE], enter the actual start date.",
"definition": "Start date of data collection for the [RESOURCE]."
}, {
"id": "Library.effectivePeriod.end",
"path": "Library.effectivePeriod.end",
"short": "End date",
"comment": "Additional information: Preferred date format: DD.MM.YYYY. | Short input help: In case of a planned or ongoing [RESOURCE], enter the intended end date. In case of a completed [RESOURCE], enter the actual end date.",
"definition": "In case of a [RESOURCE] with patients or other participants, it is the date when the last participant is examined or receives an intervention, or the date of the last participant's last visit."
}, {
"id": "Library.topic",
"path": "Library.topic",
"short": "Primary focus of the [RESOURCE]",
"mapping": [ {
"map": "Design.focus",
"identity": "NFDI4Health"
} ],
"definition": "Group of items providing information about the focus of the [RESOURCE] (e.g. medication, food, therapy, device, etc.)."
}, {
"id": "Library.topic.extension:uri",
"max": "1",
"min": 0,
"path": "Library.topic.extension",
"type": [ {
"code": "Extension",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-uri" ]
} ],
"mapping": [ {
"map": "Design.focus.code",
"identity": "NFDI4Health"
} ],
"sliceName": "uri"
}, {
"path": "Library.topic.coding",
"min": 1,
"definition": "Terminology/classification used for the focus area.",
"short": "Terminology/classification",
"binding": {
"strength": "required",
"valueSet": "https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-study-conditions-classification-nci-local"
},
"max": "1",
"id": "Library.topic.coding",
"comment": "Short Input Help: If used, name of the terminology/classification.",
"example": [ {
"label": "Example of a terminology/classification",
"valueCode": "C49469"
} ]
}, {
"id": "Library.topic.coding.code",
"path": "Library.topic.coding.code",
"mapping": [ {
"map": "Design.focus.classification",
"identity": "NFDI4Health"
} ]
}, {
"id": "Library.topic.text",
"min": 1,
"path": "Library.topic.text",
"short": "Focus area",
"comment": "Additional Information: The use of terms from established terminologies/classifications (e.g. SNOMED CT, ICD, etc.) is preferred. However, also self-assigned terms are allowed. | Short input help: Preferably, use terms from SNOMED CT (https://browser.ihtsdotools.org).",
"mapping": [ {
"map": "Design.focus.label",
"identity": "NFDI4Health"
} ],
"definition": "Focus area of the [RESOURCE] (e.g. medication, food, therapy, device, etc.)."
}, {
"id": "Library.relatedArtifact",
"max": "1",
"path": "Library.relatedArtifact",
"type": [ {
"code": "RelatedArtifact",
"profile": [ "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-pr-mds-related-artifact-resource" ]
} ]
} ]
},
"contact": [ {
"telecom": [ {
"value": "https://www.nfdi4health.de",
"system": "url"
} ]
} ],
"baseDefinition": "http://hl7.org/fhir/StructureDefinition/Library"
}