{
  "description": "Collection represents a set of samples and/or data items collected and/or derived in a common context and stored under a common stewardship and available for future research",
  "_filename": "StructureDefinition-miabis-collection.json",
  "package_name": "eu.miabis.r4",
  "date": null,
  "derivation": "constraint",
  "publisher": null,
  "fhirVersion": "4.0.1",
  "name": "Collection",
  "abstract": false,
  "type": "Group",
  "experimental": null,
  "resourceType": "StructureDefinition",
  "title": "Collection",
  "package_version": "0.1.0",
  "status": "active",
  "id": "bdce3e1d-bb07-490d-ad71-24b9a32b2d8e",
  "kind": "resource",
  "url": "https://fhir.bbmri-eric.eu/fhir/StructureDefinition/miabis-collection",
  "version": null,
  "differential": {
    "element": [ {
      "id": "Group.extension",
      "path": "Group.extension",
      "slicing": {
        "rules": "open",
        "ordered": false,
        "discriminator": [ {
          "path": "url",
          "type": "value"
        } ]
      }
    }, {
      "id": "Group.extension:numberOfSubjects",
      "max": "1",
      "min": 0,
      "path": "Group.extension",
      "type": [ {
        "code": "Extension",
        "profile": [ "https://fhir.bbmri-eric.eu/fhir/StructureDefinition/miabis-number-of-subjects-extension" ]
      } ],
      "short": "Total number of subjects included in the collection.",
      "sliceName": "numberOfSubjects",
      "mustSupport": true
    }, {
      "id": "Group.extension:inclusionCriteria",
      "max": "*",
      "min": 0,
      "path": "Group.extension",
      "type": [ {
        "code": "Extension",
        "profile": [ "https://fhir.bbmri-eric.eu/fhir/StructureDefinition/miabis-inclusion-criteria-extension" ]
      } ],
      "short": "Information on type of parameters that determine which subjects will become collection participants.",
      "sliceName": "inclusionCriteria",
      "mustSupport": true
    }, {
      "id": "Group.extension:MemberEntity",
      "max": "*",
      "min": 0,
      "path": "Group.extension",
      "type": [ {
        "code": "Extension",
        "profile": [ "http://hl7.org/fhir/5.0/StructureDefinition/extension-Group.member.entity" ]
      } ],
      "sliceName": "MemberEntity",
      "mustSupport": true
    }, {
      "id": "Group.extension:MemberEntity.value[x]",
      "path": "Group.extension.value[x]",
      "type": [ {
        "code": "Reference",
        "targetProfile": [ "http://hl7.org/fhir/StructureDefinition/Specimen" ]
      } ]
    }, {
      "id": "Group.identifier",
      "max": "1",
      "min": 1,
      "path": "Group.identifier",
      "short": "ID of the collection.",
      "mustSupport": true
    }, {
      "id": "Group.active",
      "path": "Group.active",
      "short": "The state of the collection functions.",
      "mustSupport": true
    }, {
      "id": "Group.type",
      "path": "Group.type",
      "short": "The type of resources this group contains. For this resource type, this is always set to person. (should be specimen, but this is only supported in R5)",
      "patternCode": "person"
    }, {
      "id": "Group.name",
      "min": 1,
      "path": "Group.name",
      "short": "Name of the collection (preferably in English).",
      "mustSupport": true
    }, {
      "id": "Group.managingEntity",
      "min": 1,
      "path": "Group.managingEntity",
      "type": [ {
        "code": "Reference",
        "targetProfile": [ "https://fhir.bbmri-eric.eu/fhir/StructureDefinition/miabis-collection-organization" ]
      } ],
      "short": "Organization resource containing details of this collection, such as contact information, publications, etc.",
      "mustSupport": true
    }, {
      "id": "Group.characteristic",
      "min": 2,
      "path": "Group.characteristic",
      "slicing": {
        "rules": "open",
        "discriminator": [ {
          "path": "code",
          "type": "value"
        } ]
      }
    }, {
      "id": "Group.characteristic:ageRange",
      "max": "1",
      "min": 0,
      "path": "Group.characteristic",
      "short": "Age of youngest and oldest sample donor at the time of sample donation.",
      "sliceName": "ageRange",
      "mustSupport": true
    }, {
      "id": "Group.characteristic:ageRange.code",
      "path": "Group.characteristic.code",
      "patternCodeableConcept": {
        "coding": [ {
          "code": "Age",
          "system": "https://fhir.bbmri-eric.eu/fhir/CodeSystem/miabis-characteristicCS"
        } ]
      }
    }, {
      "id": "Group.characteristic:ageRange.value[x]",
      "path": "Group.characteristic.value[x]",
      "type": [ {
        "code": "Range"
      } ]
    }, {
      "id": "Group.characteristic:sex",
      "max": "*",
      "min": 1,
      "path": "Group.characteristic",
      "short": "The sex of the individuals in the collection.",
      "sliceName": "sex",
      "mustSupport": true
    }, {
      "id": "Group.characteristic:sex.code",
      "path": "Group.characteristic.code",
      "patternCodeableConcept": {
        "coding": [ {
          "code": "Sex",
          "system": "https://fhir.bbmri-eric.eu/fhir/CodeSystem/miabis-characteristicCS"
        } ]
      }
    }, {
      "id": "Group.characteristic:sex.value[x]",
      "path": "Group.characteristic.value[x]",
      "type": [ {
        "code": "CodeableConcept"
      } ],
      "binding": {
        "strength": "required",
        "valueSet": "http://hl7.org/fhir/ValueSet/administrative-gender"
      }
    }, {
      "id": "Group.characteristic:storageTemperature",
      "max": "*",
      "min": 0,
      "path": "Group.characteristic",
      "short": "The long-term storage temperature at which the sample(s) are stored after preparation, based on SPREC v3.",
      "sliceName": "storageTemperature",
      "mustSupport": true
    }, {
      "id": "Group.characteristic:storageTemperature.code",
      "path": "Group.characteristic.code",
      "patternCodeableConcept": {
        "coding": [ {
          "code": "StorageTemperature",
          "system": "https://fhir.bbmri-eric.eu/fhir/CodeSystem/miabis-characteristicCS"
        } ]
      }
    }, {
      "id": "Group.characteristic:storageTemperature.value[x]",
      "path": "Group.characteristic.value[x]",
      "type": [ {
        "code": "CodeableConcept"
      } ],
      "binding": {
        "strength": "required",
        "valueSet": "https://fhir.bbmri-eric.eu/fhir/ValueSet/miabis-storage-temperature-vs"
      }
    }, {
      "id": "Group.characteristic:materialType",
      "max": "*",
      "min": 1,
      "path": "Group.characteristic",
      "short": "The biospecimen saved from a biological entity for propagation e.g. testing, diagnostics, treatment or research purposes.",
      "sliceName": "materialType",
      "mustSupport": true
    }, {
      "id": "Group.characteristic:materialType.code",
      "path": "Group.characteristic.code",
      "patternCodeableConcept": {
        "coding": [ {
          "code": "MaterialType",
          "system": "https://fhir.bbmri-eric.eu/fhir/CodeSystem/miabis-characteristicCS"
        } ]
      }
    }, {
      "id": "Group.characteristic:materialType.value[x]",
      "path": "Group.characteristic.value[x]",
      "type": [ {
        "code": "CodeableConcept"
      } ],
      "binding": {
        "strength": "required",
        "valueSet": "https://fhir.bbmri-eric.eu/fhir/ValueSet/miabis-collection-sample-typ-vs"
      }
    }, {
      "id": "Group.characteristic:diagnosis",
      "max": "*",
      "min": 0,
      "path": "Group.characteristic",
      "short": "The diagnosis of the individuals in the collection.",
      "sliceName": "diagnosis",
      "mustSupport": true
    }, {
      "id": "Group.characteristic:diagnosis.code",
      "path": "Group.characteristic.code",
      "patternCodeableConcept": {
        "coding": [ {
          "code": "Diagnosis",
          "system": "https://fhir.bbmri-eric.eu/fhir/CodeSystem/miabis-characteristicCS"
        } ]
      }
    }, {
      "id": "Group.characteristic:diagnosis.value[x]",
      "path": "Group.characteristic.value[x]",
      "type": [ {
        "code": "CodeableConcept"
      } ],
      "binding": {
        "strength": "required",
        "valueSet": "https://fhir.bbmri-eric.eu/fhir/ValueSet/miabis-diagnosis-vs"
      }
    } ]
  },
  "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Group"
}