description: A subset of genes or genomic regions of interest in a targeted resequencing study.
package_name: hl7.fhir.us.mcode
derivation: constraint
name: GenomicRegionStudied
type: Observation
elements:
  category:
    mustSupport: true
    index: 1
    slicing:
      slices:
        labCategory:
          match: {}
          schema:
            pattern:
              type: CodeableConcept
              value:
                coding:
                - {code: laboratory, system: 'http://terminology.hl7.org/CodeSystem/observation-category'}
            index: 2
            elements:
              coding: {index: 3}
  value:
    choices: []
    index: 12
  component:
    mustSupport: true
    index: 14
    slicing:
      slices:
        gene-studied:
          match: {}
          schema:
            mustSupport: true
            index: 15
            elements:
              code: {mustSupport: true, index: 16}
              value:
                mustSupport: true
                choices: []
                index: 18
        gene-mutations:
          match: {}
          schema:
            mustSupport: true
            index: 19
            elements:
              code: {mustSupport: true, index: 20}
              value:
                mustSupport: true
                choices: []
                index: 22
        region-description:
          match: {}
          schema:
            mustSupport: true
            index: 23
            elements:
              code: {mustSupport: true, index: 24}
              value:
                mustSupport: true
                choices: []
                index: 26
        ranges-examined:
          match: {}
          schema:
            mustSupport: true
            index: 27
            elements:
              code: {mustSupport: true, index: 28}
              value:
                mustSupport: true
                choices: []
                index: 30
        coordinate-system:
          match: {}
          schema:
            mustSupport: true
            index: 31
            elements:
              code: {mustSupport: true, index: 32}
              value:
                mustSupport: true
                choices: []
                index: 34
        genomic-ref-seq:
          match: {}
          schema:
            mustSupport: true
            index: 35
            elements:
              code: {mustSupport: true, index: 36}
              value:
                mustSupport: true
                choices: []
                index: 38
  effectiveDateTime:
    type: dateTime
    mustSupport: true
    choiceOf: effective
    index: 10
    slicing:
      slices:
        effectiveDateTime:
          match: {}
          schema: {type: dateTime, mustSupport: true, choiceOf: effective, index: 10}
          min: 0
          max: 1
  status: {mustSupport: true, index: 0}
  effective:
    mustSupport: true
    choices: []
    index: 7
    slicing:
      rules: open
      ordered: false
      discriminator:
      - {path: $this, type: type}
      min: null
      slices:
        effectiveDateTime:
          match: {}
          schema:
            mustSupport: true
            choices: [effectiveDateTime]
            index: 9
          min: 0
          max: 1
  code: {mustSupport: true, index: 4}
  subject:
    type: Reference
    mustSupport: true
    refers: ['http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-cancer-patient']
    index: 5
  dataAbsentReason: {mustSupport: true, index: 13}
package_version: 4.0.0-ballot
class: profile
kind: resource
url: http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-genomic-region-studied
base: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/region-studied
version: 4.0.0-ballot
required: [subject]