description: Observation-related profiles
package_name: hl7.fhir.uv.genomics
derivation: constraint
name: Computable Genetic Finding
type: Observation
elements:
  specimen: {short: Specimen examined, isModifier: false, mustSupport: true, index: 0}
  derivedFrom:
    isModifier: false
    mustSupport: true
    index: 1
    slicing:
      rules: open
      discriminator:
      - {path: $this, type: type}
      - {path: resolve().code, type: pattern}
      min: null
      slices:
        sequence:
          match:
            resolve(): {code: null}
          schema:
            isModifier: false
            short: Sequence
            refers: ['http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence']
            type: Reference
            mustSupport: true
            array: true
            index: 2
          min: 0
  component:
    isModifier: false
    mustSupport: true
    index: 3
    slicing:
      rules: open
      discriminator:
      - {path: code, type: pattern}
      min: null
      slices:
        gene-studied:
          match:
            code:
              coding:
              - {code: 48018-6, system: 'http://loinc.org'}
          schema:
            isModifier: false
            short: Gene studied ID
            mustSupport: true
            array: true
            index: 4
            elements:
              code:
                type: CodeableConcept
                isModifier: false
                mustSupport: true
                pattern:
                  type: CodeableConcept
                  value:
                    coding:
                    - {code: 48018-6, system: 'http://loinc.org'}
                index: 5
              valueCodeableConcept: {isModifier: false, mustSupport: true, index: 6}
            required: [valueCodeableConcept, code]
        chromosome-location:
          match:
            code:
              coding:
              - {code: 48001-2, system: 'http://loinc.org'}
          schema:
            short: Cytogenetic (chromosome) location
            isModifier: false
            mustSupport: true
            array: true
            index: 7
            elements:
              code:
                type: CodeableConcept
                isModifier: false
                mustSupport: true
                pattern:
                  type: CodeableConcept
                  value:
                    coding:
                    - {code: 48001-2, system: 'http://loinc.org'}
                index: 8
              valueCodeableConcept: {isModifier: false, mustSupport: true, index: 9}
            required: [valueCodeableConcept, code]
        dna-region-name:
          match:
            code:
              coding:
              - {code: 81293-3, system: 'http://loinc.org'}
          schema:
            isModifier: false
            short: Description of ranges of DNA sequences examined
            mustSupport: true
            array: true
            index: 10
            elements:
              code:
                type: CodeableConcept
                isModifier: false
                mustSupport: true
                pattern:
                  type: CodeableConcept
                  value:
                    coding:
                    - {code: 81293-3, system: 'http://loinc.org'}
                index: 11
              valueCodeableConcept: {isModifier: false, mustSupport: true, index: 12}
            required: [valueCodeableConcept, code]
package_version: reporting-0.1.0
class: profile
kind: resource
url: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/obs-comp-gen-finding
base: http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/obs-base
version: 2018may
required: [specimen]