PackagesCanonicalsLogsProblems
    Packages
    us.nlm.vsac@0.19.0
    http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.3616.200.110.102.5050
{
  "description": null,
  "compose": {
    "include": [ {
      "system": "http://loinc.org",
      "concept": [ {
        "code": "94307-6",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N1"
      }, {
        "code": "94308-4",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N2"
      }, {
        "code": "94309-2",
        "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Specimen by NAA with probe detection"
      }, {
        "code": "94314-2",
        "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Specimen by NAA with probe detection"
      }, {
        "code": "94316-7",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by NAA with probe detection"
      }, {
        "code": "94500-6",
        "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection"
      }, {
        "code": "94533-7",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by NAA with probe detection"
      }, {
        "code": "94534-5",
        "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory specimen by NAA with probe detection"
      }, {
        "code": "94559-2",
        "display": "SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory specimen by NAA with probe detection"
      }, {
        "code": "94565-9",
        "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with non-probe detection"
      }, {
        "code": "94639-2",
        "display": "SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Specimen by NAA with probe detection"
      }, {
        "code": "94640-0",
        "display": "SARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory specimen by NAA with probe detection"
      }, {
        "code": "94641-8",
        "display": "SARS-CoV-2 (COVID-19) S gene [Presence] in Specimen by NAA with probe detection"
      }, {
        "code": "94660-8",
        "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Serum or Plasma by NAA with probe detection"
      }, {
        "code": "94756-4",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by Nucleic acid amplification using CDC primer-probe set N1"
      }, {
        "code": "94757-2",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by Nucleic acid amplification using CDC primer-probe set N2"
      }, {
        "code": "94759-8",
        "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection"
      }, {
        "code": "94766-3",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Serum or Plasma by NAA with probe detection"
      }, {
        "code": "94767-1",
        "display": "SARS-CoV-2 (COVID-19) S gene [Presence] in Serum or Plasma by NAA with probe detection"
      }, {
        "code": "94845-5",
        "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Saliva (oral fluid) by NAA with probe detection"
      }, {
        "code": "95406-5",
        "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Nose by NAA with probe detection"
      }, {
        "code": "95409-9",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with probe detection"
      }, {
        "code": "95425-5",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by NAA with probe detection"
      }, {
        "code": "95608-6",
        "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with non-probe detection"
      }, {
        "code": "95824-9",
        "display": "SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Saliva (oral fluid) by NAA with probe detection"
      }, {
        "code": "96091-4",
        "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Saliva (oral fluid) by NAA with probe detection"
      }, {
        "code": "96120-1",
        "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Lower respiratory specimen by NAA with probe detection"
      }, {
        "code": "96123-5",
        "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Upper respiratory specimen by NAA with probe detection"
      }, {
        "code": "96448-6",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N1"
      }, {
        "code": "96763-8",
        "display": "SARS-CoV-2 (COVID-19) E gene [Presence] in Respiratory specimen by NAA with probe detection"
      }, {
        "code": "96765-3",
        "display": "SARS-CoV-2 (COVID-19) S gene [Presence] in Saliva (oral fluid) by NAA with probe detection"
      }, {
        "code": "96797-6",
        "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Oropharyngeal wash by NAA with probe detection"
      }, {
        "code": "96829-7",
        "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Specimen from Donor by NAA with probe detection"
      }, {
        "code": "96957-6",
        "display": "SARS-CoV-2 (COVID-19) M gene [Presence] in Upper respiratory specimen by NAA with probe detection"
      }, {
        "code": "96958-4",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N2"
      }, {
        "code": "96986-5",
        "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with non-probe detection"
      }, {
        "code": "97098-8",
        "display": "SARS-CoV-2 (COVID-19) Nsp2 gene [Presence] in Upper respiratory specimen by NAA with probe detection"
      }, {
        "code": "98131-6",
        "display": "SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Respiratory specimen by NAA with probe detection"
      }, {
        "code": "98132-4",
        "display": "SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Respiratory specimen by NAA with probe detection"
      }, {
        "code": "98493-0",
        "display": "SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Saliva (oral fluid) by NAA with probe detection"
      }, {
        "code": "98494-8",
        "display": "SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Saliva (oral fluid) by NAA with probe detection"
      } ]
    } ]
  },
  "_filename": "ValueSet-2.16.840.1.113883.3.3616.200.110.102.5050.json",
  "package_name": "us.nlm.vsac",
  "date": "2023-06-21T18:16:37-04:00",
  "meta": {
    "profile": [ "http://hl7.org/fhir/StructureDefinition/shareablevalueset", "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm", "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm" ],
    "versionId": "14",
    "lastUpdated": "2023-12-21T17:43:03.000-05:00"
  },
  "publisher": "Clinical Architecture",
  "jurisdiction": [ {
    "coding": [ {
      "code": "US",
      "system": "urn:iso:std:iso:3166"
    } ]
  } ],
  "purpose": "(Clinical Focus: This set of values contains terms related to quantitative and qualitative detection of nucleic acids within the multiple genes of SARS coronavirus 2 (SARS-CoV-2) in various specimens (serum, plasma, respiratory, or unspecified).),(Data Element Scope: ),(Inclusion Criteria: Includes detection of nucleic acids within the multiple genes of SARS coronavirus 2 (SARS-CoV-2) in various specimens (serum, plasma, respiratory, or unspecified).),(Exclusion Criteria: Excludes panels.)",
  "name": "SARSCoronavirus2PCRQualitativeAndQuantitative",
  "type": null,
  "experimental": "false",
  "resourceType": "ValueSet",
  "expansion": {
    "total": 41,
    "contains": [ {
      "code": "94307-6",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N1",
      "version": "2.77"
    }, {
      "code": "94308-4",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N2",
      "version": "2.77"
    }, {
      "code": "94309-2",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94314-2",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94316-7",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94500-6",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94533-7",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory system specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94534-5",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory system specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94559-2",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory system specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94565-9",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with non-probe detection",
      "version": "2.77"
    }, {
      "code": "94639-2",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94640-0",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory system specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94641-8",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) S gene [Presence] in Specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94660-8",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Serum or Plasma by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94756-4",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory system specimen by Nucleic acid amplification using CDC primer-probe set N1",
      "version": "2.77"
    }, {
      "code": "94757-2",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory system specimen by Nucleic acid amplification using CDC primer-probe set N2",
      "version": "2.77"
    }, {
      "code": "94759-8",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94766-3",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Serum or Plasma by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94767-1",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) S gene [Presence] in Serum or Plasma by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "94845-5",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Saliva (oral fluid) by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "95406-5",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Nose by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "95409-9",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "95425-5",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "95608-6",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with non-probe detection",
      "version": "2.77"
    }, {
      "code": "95824-9",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Saliva (oral fluid) by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "96091-4",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Saliva (oral fluid) by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "96120-1",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Lower respiratory specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "96123-5",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Upper respiratory specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "96448-6",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N1",
      "version": "2.77"
    }, {
      "code": "96763-8",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) E gene [Presence] in Respiratory system specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "96765-3",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) S gene [Presence] in Saliva (oral fluid) by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "96797-6",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Oropharyngeal wash by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "96829-7",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) RNA [Presence] in Specimen from Donor by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "96957-6",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) M gene [Presence] in Upper respiratory specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "96958-4",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N2",
      "version": "2.77"
    }, {
      "code": "96986-5",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with non-probe detection",
      "version": "2.77"
    }, {
      "code": "97098-8",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) Nsp2 gene [Presence] in Upper respiratory specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "98131-6",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Respiratory system specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "98132-4",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Respiratory system specimen by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "98493-0",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Saliva (oral fluid) by NAA with probe detection",
      "version": "2.77"
    }, {
      "code": "98494-8",
      "system": "http://loinc.org",
      "display": "SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Saliva (oral fluid) by NAA with probe detection",
      "version": "2.77"
    } ],
    "timestamp": "2024-06-14T16:18:04-04:00",
    "identifier": "urn:uuid:bee6c641-70a4-446a-aca7-b24316e2f8e2"
  },
  "title": "SARS Coronavirus 2 PCR, Qualitative and Quantitative",
  "package_version": "0.19.0",
  "extension": [ {
    "url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
    "valueString": "Clinical Architecture"
  }, {
    "url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
    "valueDate": "2023-06-21"
  }, {
    "url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
    "valueDate": "2022-07-15"
  } ],
  "status": "retired",
  "id": "51197a13-932c-4e06-a29c-6dc94528454e",
  "kind": null,
  "url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.3616.200.110.102.5050",
  "identifier": [ {
    "value": "urn:oid:2.16.840.1.113883.3.3616.200.110.102.5050",
    "system": "urn:ietf:rfc:3986"
  } ],
  "version": "20220715"
}