{
  "description": "Sample is a portion or quantity of biological material that is collected from a sample donor, or a digital representation of a biological entity of the sample donor, such as an image.",
  "_filename": "StructureDefinition-miabis-sample.json",
  "package_name": "eu.miabis.r4",
  "date": null,
  "derivation": "constraint",
  "publisher": null,
  "fhirVersion": "4.0.1",
  "name": "Sample",
  "abstract": false,
  "type": "Specimen",
  "experimental": null,
  "resourceType": "StructureDefinition",
  "title": "Sample",
  "package_version": "0.1.0",
  "status": "active",
  "id": "42fb0cfa-3dee-4c33-93d3-b45b8c7530c2",
  "kind": "resource",
  "url": "https://fhir.bbmri-eric.eu/fhir/StructureDefinition/miabis-sample",
  "version": null,
  "differential": {
    "element": [ {
      "id": "Specimen.identifier",
      "max": "1",
      "min": 1,
      "path": "Specimen.identifier",
      "short": "Sample ID",
      "definition": "Unique ID of the sample usually given by the data provider.",
      "mustSupport": true
    }, {
      "id": "Specimen.type",
      "min": 1,
      "path": "Specimen.type",
      "short": "Detailed Sample type",
      "binding": {
        "strength": "required",
        "valueSet": "https://fhir.bbmri-eric.eu/fhir/ValueSet/miabis-detailed-sample-type-vs"
      },
      "definition": "The type of biological specimen.",
      "mustSupport": true
    }, {
      "id": "Specimen.subject",
      "min": 1,
      "path": "Specimen.subject",
      "type": [ {
        "code": "Reference",
        "targetProfile": [ "https://fhir.bbmri-eric.eu/fhir/StructureDefinition/miabis-sample-donor" ]
      } ],
      "short": "Donor of the sample",
      "definition": "The person or entity from whom the sample was collected",
      "mustSupport": true
    }, {
      "id": "Specimen.collection.collected[x]",
      "path": "Specimen.collection.collected[x]",
      "slicing": {
        "rules": "open",
        "ordered": false,
        "discriminator": [ {
          "path": "$this",
          "type": "type"
        } ]
      }
    }, {
      "path": "Specimen.collection.collected[x]",
      "min": 0,
      "definition": "The date and time the sample was created.",
      "short": "Sample creation date and time",
      "type": [ {
        "code": "dateTime"
      } ],
      "mustSupport": true,
      "sliceName": "collectedDateTime",
      "max": "1",
      "id": "Specimen.collection.collected[x]:collectedDateTime"
    }, {
      "id": "Specimen.collection.bodySite.coding",
      "max": "1",
      "path": "Specimen.collection.bodySite.coding",
      "constraint": [ {
        "key": "SpecimenOntologyInvariant",
        "human": "bodySite.concept.coding.system and bodySite.concept.coding.version are required if any ontology information is provided",
        "source": "https://fhir.bbmri-eric.eu/fhir/StructureDefinition/miabis-sample",
        "severity": "error",
        "expression": "Specimen.collection.bodySite.concept.coding.exists() implies (Specimen.collection.bodySite.concept.coding.system.exists() and Specimen.collection.bodySite.concept.coding.version.exists())"
      } ],
      "mustSupport": true
    }, {
      "id": "Specimen.collection.bodySite.coding.system",
      "path": "Specimen.collection.bodySite.coding.system",
      "definition": "Name of ontology used for describing the anatomical source of the sample material, for example, ICD-O-3 topography code"
    }, {
      "id": "Specimen.collection.bodySite.coding.version",
      "path": "Specimen.collection.bodySite.coding.version",
      "definition": "Version of the ontology used for describing the anatomical source of the sample material"
    }, {
      "id": "Specimen.collection.bodySite.coding.code",
      "path": "Specimen.collection.bodySite.coding.code",
      "definition": "Anatomical site code from the selected anatomical site ontology version"
    }, {
      "id": "Specimen.collection.bodySite.coding.display",
      "path": "Specimen.collection.bodySite.coding.display",
      "definition": "Description from the selected anatomical site ontology code"
    }, {
      "id": "Specimen.processing.extension",
      "path": "Specimen.processing.extension",
      "slicing": {
        "rules": "open",
        "ordered": false,
        "discriminator": [ {
          "path": "url",
          "type": "value"
        } ]
      }
    }, {
      "id": "Specimen.processing.extension:storageTemperature",
      "max": "1",
      "min": 0,
      "path": "Specimen.processing.extension",
      "type": [ {
        "code": "Extension",
        "profile": [ "https://fhir.bbmri-eric.eu/fhir/StructureDefinition/miabis-sample-storage-temperature-extension" ]
      } ],
      "sliceName": "storageTemperature",
      "mustSupport": true
    }, {
      "id": "Specimen.note",
      "path": "Specimen.note",
      "short": "Use restrictions",
      "definition": "The restrictions that may change the availability of the samples donated by the sample donor",
      "mustSupport": true
    }, {
      "id": "Specimen.note.text",
      "path": "Specimen.note.text",
      "short": "actual use restrictions",
      "definition": "acual text of the restrictions that may change the availability of the samples donated by the sample donor",
      "mustSupport": true
    } ]
  },
  "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Specimen"
}