{
  "description": "A code that represents the confidence of a true positive variant call.",
  "_filename": "CodeSystem-variant-confidence-status-cs.json",
  "package_name": "hl7.fhir.uv.genomics-reporting",
  "date": "2024-12-12T20:43:36+00:00",
  "publisher": "HL7 International / Clinical Genomics",
  "jurisdiction": [ {
    "coding": [ {
      "code": "001",
      "system": "http://unstats.un.org/unsd/methods/m49/m49.htm",
      "display": "World"
    } ]
  } ],
  "content": "complete",
  "name": "VariantConfidenceStatusCS",
  "type": null,
  "experimental": "true",
  "resourceType": "CodeSystem",
  "title": "Variant Confidence Status Codes",
  "package_version": "3.0.0",
  "extension": [ {
    "url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
    "valueCode": "cg"
  } ],
  "status": "active",
  "id": "2f7ba1ab-2f78-4e55-b89f-beb9f63acdc6",
  "kind": null,
  "count": 3,
  "url": "http://terminology.hl7.org/CodeSystem/variant-confidence-status-cs",
  "concept": [ {
    "code": "high",
    "display": "High",
    "definition": "High confidence true positive variant call. Suitable for clinical reporting."
  }, {
    "code": "intermediate",
    "display": "Intermediate",
    "definition": "Candidate true positive variant call. Unable to confirm without additional testing."
  }, {
    "code": "low",
    "display": "Low",
    "definition": "High confidence false positive variant call."
  } ],
  "caseSensitive": true,
  "version": "3.0.0",
  "contact": [ {
    "name": "HL7 International / Clinical Genomics",
    "telecom": [ {
      "value": "http://www.hl7.org/Special/committees/clingenomics",
      "system": "url"
    }, {
      "value": "cg@lists.HL7.org",
      "system": "email"
    } ]
  } ]
}