{
"description": "A normally sterile site is defined as: blood bone and bone marrow cerebrospinal fluid (CSF) internal body sites specimen obtained from surgery or aspirate from one of the following: brain, heart, kidney, liver, lymph node, ovary, pancreas, spleen, vascular tissue, vitreous fluid: joint fluid includes synovial fluid and needle aspirate or culture of any specific joint: ankle, elbow, hip, knee, wrist muscle pericardial fluid peritoneal fluid includes abdominal fluid, ascites pleural fluid includes chest fluid, thoracentesis fluid",
"compose": {
"include": [ {
"system": "http://loinc.org",
"concept": [ {
"code": "40972-2",
"display": "XXX microorganism DNA [Presence] in Serum or Plasma by NAA with probe detection"
}, {
"code": "62201-9",
"display": "XXX microorganism DNA [Identifier] in Serum or Plasma by NAA with probe detection"
}, {
"code": "82125-6",
"display": "Respiratory pathogens DNA and RNA tested for in Pleural fluid by NAA with probe detection"
}, {
"code": "82127-2",
"display": "Respiratory pathogens DNA and RNA identified in Pleural fluid by NAA with probe detection"
} ]
} ]
},
"_filename": "ValueSet-2.16.840.1.113762.1.4.1146.1085.json",
"package_name": "us.nlm.vsac",
"date": "2019-12-29T01:00:18-05:00",
"meta": {
"profile": [ "http://hl7.org/fhir/StructureDefinition/shareablevalueset", "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm" ],
"versionId": "6",
"lastUpdated": "2019-12-29T01:00:18.000-05:00"
},
"publisher": "CSTE Steward",
"jurisdiction": [ {
"coding": [ {
"code": "US",
"system": "urn:iso:std:iso:3166"
} ]
} ],
"purpose": "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the nucleic acid of non-specific organisms from a normally sterile site),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: VSAC query: Nucleic Acid Sterile Site;\nLOINC Search: \"(microorganism or pathogens) (blood or serum or plasma or cerebral or CSF or tissue or fluid) nucleic acid -panel\"),(Exclusion Criteria: Exclude LOINC codes for the following Systems: (Anal, Cervix, Genital, Genital fld, Genital mucus, Pus, Throat, Urethra, Urine, Vag, Bronchial, Ear, Nose, Sputum, Stool, Semen, Wound).\nExclude panel tests.)",
"name": "OrganismsTestsForNucleicAcidInSpecimenFromNormallySterileSite",
"type": null,
"experimental": "false",
"resourceType": "ValueSet",
"expansion": {
"total": 4,
"contains": [ {
"code": "40972-2",
"system": "http://loinc.org",
"display": "XXX microorganism DNA [Presence] in Serum or Plasma by NAA with probe detection",
"version": "2.76"
}, {
"code": "62201-9",
"system": "http://loinc.org",
"display": "XXX microorganism DNA [Identifier] in Serum or Plasma by NAA with probe detection",
"version": "2.76"
}, {
"code": "82125-6",
"system": "http://loinc.org",
"display": "Respiratory pathogens DNA and RNA tested for in Pleural fluid by NAA with probe detection",
"version": "2.76"
}, {
"code": "82127-2",
"system": "http://loinc.org",
"display": "Respiratory pathogens DNA and RNA identified in Pleural fluid by NAA with probe detection",
"version": "2.76"
} ],
"timestamp": "2023-12-10T21:51:31-05:00",
"identifier": "urn:uuid:902d3836-d87b-4394-97d4-37a34b157fd9"
},
"title": "Organisms (Tests for Nucleic Acid in Specimen from Normally Sterile Site)",
"package_version": "0.17.0",
"extension": [ {
"url": "http://hl7.org/fhir/StructureDefinition/valueset-author",
"valueString": "CSTE Author"
}, {
"url": "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
"valueString": "G_Common"
}, {
"url": "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
"valueDate": "2022-12-15"
}, {
"url": "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
"valueDate": "2019-12-29"
} ],
"status": "active",
"id": "0cfffef6-90ba-4579-a14c-434be26710e0",
"kind": null,
"url": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.1085",
"identifier": [ {
"value": "urn:oid:2.16.840.1.113762.1.4.1146.1085",
"system": "urn:ietf:rfc:3986"
} ],
"version": "20191229"
}